Since there is really no info online regarding this situation, I figured I would share the reply I received from AGS support when I raised some questions to them.
I basically asked them about the permanent rewards from the auto completed roster quests (skill points, some vitality potions and stat potions) I wasnt sure If I received these rewards from the auto completion and since I cant do the quests anymore, did I miss out on them? The reply I got was thus:
So basically they don’t know about this and are asking (I assume Smilegate) to confirm.
They mentioned posting here to get a followup later so I’m hoping to get some info regarding this once its available.